BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038D04SP1|AL430529
(873 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig859 1686 0.0
>3x_Contig859
Length = 2084
Score = 1686 bits (849), Expect = 0.0
Identities = 867/873 (99%)
Strand = Plus / Plus
Query: 1 ccagacaatagctccgaaacaaagcgtggcaaggcccatcaccatcaacaaccatcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 ccagacaatagctccgaaacaaagcgtggcaaggcccatcaccatcaacaaccatcatca 962
Query: 61 agatctggtacgcctgtcgtcggatcgaaaaaacagcagaggaaaggtaaagacataccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 agatctggtacgcctgtcgtcggatcgaaaaaacagcagaggaaaggtaaagacataccg 1022
Query: 121 ttggcaccaaaagccgatatccgtcttcctgacaaagaatacgacagtttggacgaagaa 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1023 ttggcaccaaaagccgatatccgtcttcctgacaaagaatacgacagtatggacgaagaa 1082
Query: 181 gagtgtaagaaaacgatgacaaacgtccgtagctcactcaaacgtctaagatctggagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1083 gagtgtaagaaaacgatgacaaacgtccgtagctcactcaaacgtctaagatctggagga 1142
Query: 241 gacggtcttgaacgtaagcyatgggctaacctattgaagaaggaattgaaacgtgttggt 300
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1143 gacggtcttgaacgtaagcaatgggctaacctattgaagaaggaattgaaacgtgttggt 1202
Query: 301 gactacatcgaatcgcacaagaaggactcgtctaagacctctccagaaaaatataaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1203 gactacatcgaatcgcacaagaaggactcgtctaagacctctccagaaaaatataaaaga 1262
Query: 361 catttatggtctttcactgcatattactggccaagagatgtcccatcttccaaactcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1263 catttatggtctttcactgcatattactggccaagagatgtcccatcttccaaactcctg 1322
Query: 421 gcgatgtacgacaaaatcaaagcctctgaacattaattagtcaaatgtaacaaaacatag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1323 gcgatgtacgacaaaatcaaagcctctgaacattaattagtcaaatgtaacaaaacatag 1382
Query: 481 agatatatacgcctatcaatttacgaaaaaaaaaaagatatctaatcaacaacatattgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1383 agatatatacgcctatcaatttacgaaaaaaaaaaagatatctaatcaacaacatattgc 1442
Query: 541 tattagttattattaccttcataaatgacatgaggcacaagggcgcaccagaaacagccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1443 tattagttattattaccttcataaatgacatgaggcacaagggcgcaccagaaacagccg 1502
Query: 601 gctgctagtaaaatacctggtttgttgtggtgatgcctcagatcatttcgcacgttccta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1503 gctgctagtaaaatacctggtttgttgtggtgatgcctcagatcatttcgcacgtaccta 1562
Query: 661 cctttccttttgtggaaaagctttaaactctttttcaactctttaaatttttcaatgaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1563 cctttccttttgtggaaaagctttaaactctttttcaactctttaaatttttcaatgaaa 1622
Query: 721 attttcactctttggctaactcatcacaacaattaaggactgttctcacagagatggatg 780
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1623 attttcactttttggctaactcatcacaacaattaaggactgttctcacagagatggatg 1682
Query: 781 aattatataacgattttaaataagttcttgtgatgttgtgtcatttatttaatttgttat 840
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1683 aattatataacgattttaaataagttcttgtgatgttgtttcatttatttaatttgttat 1742
Query: 841 aagtttttagttatcttggttagtrtatactgt 873
|||||||||||||||||||||||| ||||||||
Sbjct: 1743 aagtttttagttatcttggttagtttatactgt 1775
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,366
Number of Sequences: 1807
Number of extensions: 12366
Number of successful extensions: 83
Number of sequences better than 1.0e-20: 1
length of query: 873
length of database: 10,358,551
effective HSP length: 16
effective length of query: 857
effective length of database: 10,329,639
effective search space: 8852500623
effective search space used: 8852500623
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)